parallel imaging
Edge-Enhanced Dual Discriminator Generative Adversarial Network for Fast MRI with Parallel Imaging Using Multi-view Information
Huang, Jiahao, Ding, Weiping, Lv, Jun, Yang, Jingwen, Dong, Hao, Del Ser, Javier, Xia, Jun, Ren, Tiaojuan, Wong, Stephen, Yang, Guang
In clinical medicine, magnetic resonance imaging (MRI) is one of the most important tools for diagnosis, triage, prognosis, and treatment planning. However, MRI suffers from an inherent slow data acquisition process because data is collected sequentially in k-space. In recent years, most MRI reconstruction methods proposed in the literature focus on holistic image reconstruction rather than enhancing the edge information. This work steps aside this general trend by elaborating on the enhancement of edge information. Specifically, we introduce a novel parallel imaging coupled dual discriminator generative adversarial network (PIDD-GAN) for fast multi-channel MRI reconstruction by incorporating multi-view information. The dual discriminator design aims to improve the edge information in MRI reconstruction. One discriminator is used for holistic image reconstruction, whereas the other one is responsible for enhancing edge information. An improved U-Net with local and global residual learning is proposed for the generator. Frequency channel attention blocks (FCA Blocks) are embedded in the generator for incorporating attention mechanisms. Content loss is introduced to train the generator for better reconstruction quality. We performed comprehensive experiments on Calgary-Campinas public brain MR dataset and compared our method with state-of-the-art MRI reconstruction methods. Ablation studies of residual learning were conducted on the MICCAI13 dataset to validate the proposed modules. Results show that our PIDD-GAN provides high-quality reconstructed MR images, with well-preserved edge information. The time of single-image reconstruction is below 5ms, which meets the demand of faster processing.
Data consistency networks for (calibration-less) accelerated parallel MR image reconstruction
Schlemper, Jo, Duan, Jinming, Ouyang, Cheng, Qin, Chen, Caballero, Jose, Hajnal, Joseph V., Rueckert, Daniel
We present simple reconstruction networks for multi-coil data by extending deep cascade of CNN's and exploiting the data consistency layer. In particular, we propose two variants, where one is inspired by POCSENSE and the other is calibration-less. We show that the proposed approaches are competitive relative to the state of the art both quantitatively and qualitatively.
DeepcomplexMRI: Exploiting deep residual network for fast parallel MR imaging with complex convolution
Wang, Shanshan, Cheng, Huitao, Ying, Leslie, Xiao, Taohui, Ke, Ziwen, Liu, Xin, Zheng, Hairong, Liang, Dong
Word count: 4980 Abstract Purpose: To accelerate MR scan, this paper incorporates deep learning into fast MR imaging by exploiting deep residual neural network with complex convolution for parallel MR image (DeepMRI) reconstruction from undersampled multi-coil measurements. Methods: DeepMRI draws and utilizes prior knowledge from a large number of existing fullysampled multi-coil measurements for accurate online fast imaging. It designs and trains an offline deep residual convolutional neural network to describe the mapping relationship between the MR images reconstructed from the undersampled and fully-sampled k-space data. Specifically, complex convolution was proposed to consider the intercorrelation between the real and imaginary parts. Furthermore, both k-space data fidelity and image space proximity are considered for the network training. Results: The evaluations on in vivo datasets show that the proposed DeepMRI has strong capability in capturing image information that are lost in the zero-filled MR images. The comparison with the classical SPIRiT and L1-SPIRiT has demonstrated that DeepMRI can reconstruct MR images more accurately.
Highly Accelerated Multishot EPI through Synergistic Combination of Machine Learning and Joint Reconstruction
Bilgic, Berkin, Chatnuntawech, Itthi, Manhard, Mary Kate, Tian, Qiyuan, Liao, Congyu, Cauley, Stephen F., Huang, Susie Y., Polimeni, Jonathan R., Wald, Lawrence L., Setsompop, Kawin
Purpose: To introduce a combined machine learning (ML) and physics-based image reconstruction framework that enables navigator-free, highly accelerated multishot echo planar imaging (msEPI), and demonstrate its application in high-resolution structural imaging. Methods: Singleshot EPI is an efficient encoding technique, but does not lend itself well to high-resolution imaging due to severe distortion artifacts and blurring. While msEPI can mitigate these artifacts, high-quality msEPI has been elusive because of phase mismatch arising from shot-to-shot physiological variations which disrupt the combination of the multiple-shot data into a single image. We employ Deep Learning to obtain an interim magnitude-valued image with minimal artifacts, which permits estimation of image phase variations due to shot-to-shot physiological changes. These variations are then included in a Joint Virtual Coil Sensitivity Encoding (JVC-SENSE) reconstruction to utilize data from all shots and improve upon the ML solution. Results: Our combined ML + physics approach enabled R=8-fold acceleration from 2 EPI-shots while providing 1.8-fold error reduction compared to the MUSSELS, a state-of-the-art reconstruction technique, which is also used as an input to our ML network. Using 3 shots allowed us to push the acceleration to R=10-fold, where we obtained a 1.7-fold error reduction over MUSSELS. Conclusion: Combination of ML and JVC-SENSE enabled navigator-free msEPI at higher accelerations than previously possible while using fewer shots, with reduced vulnerability to poor generalizability and poor acceptance of end-to-end ML approaches.